AutismKB

Reference
Reference Population #SNPs/ #VNTRs #Families Affecteds Result
#Subjects
(% Women)
ADI-R ADOS Diagnosis Age
(range)
IQ
(range)
CAUCASIAN
Serajee, 2006_1 AGRE 34 (detail) 200 415
(-)
ASD 7
-
-
-
Total number of polymorphisms investigated by this study: 34
1.FAMILY-BASED ASSOCIATION STUDIES (BY STATISTIC METHOD)
Polymorphism ID Polymorphism Name#
(Link to NCBI)
Results #Informative Families Alele Name Transmitted (frequency) Non-Transmitted (frequency) P value
Transmission Disequilibrium Test (TDT)
AutS000048 rs362691 Positive - C
G
83 ( - )
43 ( - )
43 ( - )
83 ( - )
0.002
AutS000067 rs3808045 Negative - C
T
43 ( - )
41 ( - )
41 ( - )
43 ( - )
0.84
AutS000076 rs736707 Positive - C
T
106 ( - )
52 ( - )
52 ( - )
106 ( - )
0.000014
AutS000221 rs2299388 Negative - C
T
82 ( - )
78 ( - )
78 ( - )
82 ( - )
0.75
AutS000272 rs2229860 Negative - C
G
1 ( - )
0 ( - )
0 ( - )
1 ( - )
0.24
AutS000332 rs39353 Negative - A
C
123 ( - )
127 ( - )
127 ( - )
123 ( - )
0.8
AutS000340 rs144525 Negative - A
G
116 ( - )
119 ( - )
119 ( - )
116 ( - )
0.84
AutS000451 rs2073559 Negative - C
T
123 ( - )
124 ( - )
124 ( - )
123 ( - )
0.56
AutS000462 rs123713 Negative - C
T
138 ( - )
127 ( - )
127 ( - )
138 ( - )
0.49
AutS000497 rs2240965 Negative - C
T
117 ( - )
99 ( - )
99 ( - )
117 ( - )
0.22
AutS000532 rs2299395 Negative - A
G
44 ( - )
35 ( - )
35 ( - )
44 ( - )
0.31
AutS000695 rs362746 Negative - A
G
8 ( - )
9 ( - )
9 ( - )
8 ( - )
1
AutS000730 rs12538307 Negative - C
T
71 ( - )
82 ( - )
82 ( - )
71 ( - )
0.37
AutS000808 rs2237635 Negative - C
G
48 ( - )
55 ( - )
55 ( - )
48 ( - )
0.49
AutS000810 rs1062831 Negative - C
T
40 ( - )
42 ( - )
42 ( - )
40 ( - )
0.83
AutS000933 rs2075038 Positive - A
G
4 ( - )
14 ( - )
14 ( - )
4 ( - )
0.02
AutS001013 rs2283023 Negative - A
C
63 ( - )
53 ( - )
53 ( - )
63 ( - )
0.35
AutS001038 rs661575 Negative - C
T
139 ( - )
147 ( - )
147 ( - )
139 ( - )
0.64
AutS001254 rs607755 Negative - A
G
138 ( - )
157 ( - )
157 ( - )
138 ( - )
0.27
AutS001287 rs3213611 Negative - C
T
61 ( - )
56 ( - )
56 ( - )
61 ( - )
0.64
AutS001420 rs2237632 Negative - A
G
61 ( - )
62 ( - )
62 ( - )
61 ( - )
0.92
AutS001749 rs123714 Negative - C
T
137 ( - )
127 ( - )
127 ( - )
137 ( - )
0.54
AutS002176 rs362726 Negative - C
T
160 ( - )
137 ( - )
137 ( - )
160 ( - )
0.18
AutS002373 rs362710 Negative - C
T
158 ( - )
128 ( - )
128 ( - )
158 ( - )
0.11
AutS002645 rs722277 Negative - A
G
142 ( - )
165 ( - )
165 ( - )
142 ( - )
0.18
AutS002776 rs264373 Positive - C
G
159 ( - )
122 ( - )
122 ( - )
159 ( - )
0.03
AutS002831 rs2073551 Negative - G
T
147 ( - )
139 ( - )
139 ( - )
147 ( - )
0.64
AutS002885 rs2256658 Negative - C
T
38 ( - )
44 ( - )
44 ( - )
38 ( - )
0.51
AutS003059 rs39360 Negative - A
C
115 ( - )
115 ( - )
115 ( - )
115 ( - )
1
AutS003139 rs3735630 Negative - A
G
129 ( - )
140 ( - )
140 ( - )
129 ( - )
0.5
AutS003205 rs977639 Negative - C
T
45 ( - )
65 ( - )
65 ( - )
45 ( - )
0.06
AutS003209 rs2073557 Negative - A
G
139 ( - )
146 ( - )
146 ( - )
139 ( - )
0.68
AutS003248 rs7811571 Negative - A
G
2 ( - )
0 ( - )
0 ( - )
2 ( - )
0.09
AutS003382 rs7800855 Negative - A
G
66 ( - )
64 ( - )
64 ( - )
66 ( - )
0.86

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  (e.g. NLGN4X)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
  • Click to Download Data

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