AutismKB

View SNPs/VNTRs


View by Chromosome: All( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )



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SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
51 rs4327572 AutS002677chr5:26008577 -26008578unknown CDH10AutG10080 0 2 1
52 rs4731863 AutS003194chr7:131674322 -131674323intron PLXNA4AutG915840 0 2 1
53 rs1912960 AutS001438chr4:46648637 -46648638intron GABRA4AutG25573 0 0 0
54 rs3763463 AutS003154chr7:107884726 -107884727near-gene-5 NRCAMAutG48972 1 0 0
55 rs788173 AutS002534chr2:172661705 -172661706untranslated-3 DLX1AutG17453 0 0 0
56 rs10784941 AutS000792chr12:70622778 -70622779intron TPH2AutG1212783 0 0 0
57 rs11080149 AutS002389chr17:26647413 -26647414intron,missense OMGAutG49741 2 0 0
58 rs35399885 AutS002688chr15_random:761537 -761538unknown GABRA5AutG25583 0 0 0
59 rs140674 AutS001685chr15:25156713 -25156714coding-synon GABRG3AutG25673 0 0 0
60 rs2268491 AutS000260chr3:8775397 -8775398intron OXTRAutG50212 1 0 0
61 rs607755 AutS001254chr7:103177189 -103177190intron RELNAutG56492 1 0 0
62 rs6289 AutS002674chr4:47103465 -47103466coding-synon GABRB1AutG25603 0 0 0
63 rs7704909 AutS000709chr5:25934677 -25934678unknown CDH9AutG10070 0 2 1
64 rs722519 AutS002223chr7:107813778 -107813779intron NRCAMAutG48972 1 0 0
65 rs1896731 AutS002970chr5:25934776 -25934777unknown CDH9AutG10070 0 2 1
66 rs6284 AutS002919chr4:47016975 -47016976coding-synon GABRB1AutG25603 0 0 0
67 rs6958498 AutS003357chr7:107621848 -107621849missense NRCAMAutG48972 1 0 0
68 rs4307059 AutS000415chr5:26003459 -26003460unknown CDH9AutG10070 0 2 1
69 rs2059574 AutS001628chr15:24548135 -24548136intron GABRB3AutG25622 1 0 0
70 rs4695226 AutS001809chr4:47077676 -47077677intron GABRB1AutG25603 0 0 0
71 rs208129 AutS003303chr15:25007652 -25007653intron GABRG3AutG25673 0 0 0
72 rs12518194 AutS002520chr5:25987317 -25987318unknown CDH10AutG10080 0 2 1
73 rs6951030 AutS000148chr7:72771176 -72771177intron STX1AAutG68043 0 0 0
74 rs12620556 AutS001456chr2:158905016 -158905017missense CCDC148AutG1309400 0 2 1
75 rs1322784 AutS001122chr1:229995557 -229995558intron DISC1AutG271853 0 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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