AutismKB

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View by Chromosome: All( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )


SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
26 rs2301261 AutS000543chr3:8785895 -8785896intron OXTRAutG50211 1 0 2
27 rs2081648 AutS003045chr15:24349291 -24349292intron GABRB3AutG25624 0 0 0
28 rs6311 AutS002459chr13:46369478 -46369479near-gene-5 HTR2AAutG33563 1 0 0
29 rs2268495 AutS001979chr3:8782534 -8782535intron OXTRAutG50213 1 0 0
30 rs1042778 AutS001980chr3:8769544 -8769545untranslated-3 OXTRAutG50213 1 0 0
31 rs5918 AutS002009chr17:42715728 -42715729missense ITGB3AutG36904 0 0 0
32 rs2268490 AutS000891chr3:8772084 -8772085intron OXTRAutG50212 0 0 2
33 rs2066713 AutS003309chr17:25575790 -25575791intron SLC6A4AutG65324 0 0 0
34 rs890317 AutS000079chr15:24473293 -24473294intron GABRB3AutG25623 1 0 0
35 rs140679 AutS000240chr15:25446270 -25446271coding-synon GABRG3AutG25674 0 0 0
36 rs821616 AutS000578chr1:230211220 -230211221missense DISC1AutG271853 1 0 0
37 rs2217262 AutS001186chr7:111583612 -111583613intron DOCK4AutG97320 0 2 2
38 rs1426217 AutS001389chr15:24372217 -24372218intron GABRB3AutG25624 0 0 0
39 rs10258862 AutS000145chr7:39083322 -39083323intron POU6F2AutG112810 0 4 0
40 rs2268491 AutS000260chr3:8775397 -8775398intron OXTRAutG50212 1 0 0
41 rs1322784 AutS001122chr1:229995557 -229995558intron DISC1AutG271853 0 0 0
42 rs607755 AutS001254chr7:103177189 -103177190intron RELNAutG56492 1 0 0
43 rs12620556 AutS001456chr2:158905016 -158905017missense CCDC148AutG1309400 0 2 1
44 rs35399885 AutS002688chr15_random:761537 -761538unknown GABRA5AutG25583 0 0 0
45 rs7704909 AutS000709chr5:25934677 -25934678unknown CDH9AutG10070 0 2 1
46 rs722519 AutS002223chr7:107813778 -107813779intron NRCAMAutG48972 1 0 0
47 rs10038113 AutS002064chr5:25938098 -25938099unknown CDH9AutG10070 0 2 1
48 rs6289 AutS002674chr4:47103465 -47103466coding-synon GABRB1AutG25603 0 0 0
49 rs2171493 AutS000739chr7:129693382 -129693383near-gene-5 CPA2AutG13580 0 2 1
50 rs1873423 AutS001800chr16:23878177 -23878178intron PRKCBAutG55793 0 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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