AutismKB

View SNPs/VNTRs


View by Chromosome: 12( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )


SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
26 rs2291739 AutS000671chr12:55100919 -55100920missense TIMELESSAutG89141 0 0 0
27 rs3741890 AutS001266chr12:105911154 -105911155intron CRY1AutG14071 0 0 0
28 rs3803107 AutS002796chr12:61827100 -61827101untranslated-3 AVPR1AAutG5521 0 0 0
29 rs10444509 AutS001243chr12:100738160 -100738161intron GNPTABAutG791580 0 1 0
30 rs2279665 AutS002713chr12:55113960 -55113961coding-synon TIMELESSAutG89141 0 0 0
31 rs3741480 AutS000548chr12:116190156 -116190157intron NOS1AutG48421 0 0 0
32 rs1894827 AutS001162chr12:7834642 -7834643intron NANOGAutG799230 0 1 0
33 rs1921126 AutS002557chr12:105935734 -105935735intron CRY1AutG14071 0 0 0
34 rs11174815 AutS001820chr12:61833362 -61833363near-gene-5 AVPR1AAutG5521 0 0 0
35 rs7397862 AutS003333chr12:65100753 -65100754intron GRIP1AutG234260 1 0 0
36 rs11615016 AutS000438chr12:70702260 -70702261intron TPH2AutG1212780 1 0 0
37 rs9658247 AutS000965chr12:116285867 -116285868near-gene-3 NOS1AutG48421 0 0 0
38 rs1042615 AutS002536chr12:61830475 -61830476coding-synon AVPR1AAutG5521 0 0 0
39 rs10876450 AutS001651chr12:52097300 -52097301unknown SP1AutG66671 0 0 0
40 rs7963720 AutS003219chr12:70652452 -70652453intron TPH2AutG1212780 1 0 0
41 rs12366827 AutS001576chr12:7834102 -7834103intron NANOGAutG799230 0 1 0
42 rs7978692 AutS003023chr12:70652384 -70652385intron TPH2AutG1212780 1 0 0
43 rs4290270 AutS000279chr12:70702501 -70702502coding-synon TPH2AutG1212780 1 0 0
44 rs4570625 AutS002342chr12:70618189 -70618190near-gene-5 TPH2AutG1212781 0 0 0
45 rs1048230 AutS001501chr12:49672332 -49672333coding-synon SLC11A2AutG48911 0 0 0
46 rs9658255 AutS002964chr12:116284138 -116284139near-gene-3 NOS1AutG48421 0 0 0
47 rs3825251 AutS000153chr12:107812112 -107812113intron DAOAutG16101 0 0 0
48 rs2078074 AutS000745chr12:105960935 -105960936intron CRY1AutG14071 0 0 0
49 rs7305115 AutS001373chr12:70659128 -70659129coding-synon TPH2AutG1212780 1 0 0
50 rs11055784 AutS000088chr12:7836091 -7836092intron NANOGAutG799230 0 1 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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