AutismKB

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View by Chromosome: X( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )


SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs6646569 AutS000139chrX:119125801 -119125802unknown RHOXF1AutG1588000 0 1 1
2 rs5972577 AutS002367chrX:32390210 -32390211intron DMDAutG17560 0 1 1
3 rs11798405 AutS001790chrX:4940800 -4940801unknown NLGN4XAutG575020 0 1 1
4 rs11798405 AutS003101chrX:4940800 -4940801unknown PRKXAutG56130 0 1 1
5 rs6318 AutS001451chrX:113871990 -113871991missense HTR2CAutG33581 1 0 0
6 rs5946005 AutS000125chrX:113988790 -113988791intron HTR2CAutG33581 1 0 0
7 rs915942 AutS000019chrX:153279931 -153279932intron RPL10AutG61340 1 0 0
8 rs5945173 AutS002093chrX:152903365 -152903366unknown MECP2AutG42041 0 0 0
9 rs2239683 AutS003256chrX:152479193 -152479194intron ATP2B3AutG4920 1 0 0
10 rs1883069 AutS001836chrX:70298999 -70299000intron NLGN3AutG544131 0 0 0
11 rs2980017 AutS003145chrX:152477985 -152477986intron ATP2B3AutG4920 1 0 0
12 rs35106866 AutS003028chrX:70301225 -70301226intron NLGN3AutG544131 0 0 0
13 rs2239682 AutS001395chrX:152471628 -152471629intron ATP2B3AutG4920 1 0 0
14 rs1137070 AutS002781chrX:43488334 -43488335coding-synon MAOAAutG41281 0 0 0
15 rs3747333 AutS000652chrX:5821531 -5821532missense NLGN4XAutG575021 0 0 0
16 rs5916338 AutS002648chrX:6145528 -6145529intron NLGN4XAutG575020 1 0 0
17 rs3747334 AutS000269chrX:5821529 -5821530coding-synon NLGN4XAutG575021 0 0 0
18 rs5945175 AutS002488chrX:153011950 -153011951intron,near-gene-5 MECP2AutG42041 0 0 0
19 rs7049300 AutS002284chrX:5831785 -5831786coding-synon NLGN4XAutG575021 0 0 0
20 rs2290488 AutS001946chrX:6155854 -6155855intron,untranslated-5 NLGN4XAutG575021 0 0 0
21 rs11465839 AutS003216chrX:152933460 -152933461intron MECP2AutG42041 0 0 0
22 rs5945397 AutS001826chrX:153026719 -153026720unknown MECP2AutG42041 0 0 0
23 rs4898360 AutS003129chrX:152495934 -152495935intron ATP2B3AutG4920 1 0 0
24 rs3027407 AutS001722chrX:43489784 -43489785untranslated-3 MAOAAutG41281 0 0 0
25 rs11348580 AutS003037chrX:152964598 -152964599intron MECP2AutG42041 0 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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