AutismKB

View SNPs/VNTRs


View by Chromosome: All( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:GWAS case control( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )



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SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs2268490 AutS000891chr3:8772084 -8772085intron OXTRAutG50212 0 0 2
2 rs2217262 AutS001186chr7:111583612 -111583613intron DOCK4AutG97320 0 2 2
3 rs2301261 AutS000543chr3:8785895 -8785896intron OXTRAutG50211 1 0 2
4 rs7704909 AutS000709chr5:25934677 -25934678unknown CDH9AutG10070 0 2 1
5 rs12620556 AutS001456chr2:158905016 -158905017missense CCDC148AutG1309400 0 2 1
6 rs12537269 AutS000036chr7:110184782 -110184783intron IMMP2LAutG839430 0 1 2
7 rs4731863 AutS003194chr7:131674322 -131674323intron PLXNA4AutG915840 0 2 1
8 rs12518194 AutS002520chr5:25987317 -25987318unknown CDH10AutG10080 0 2 1
9 rs10038113 AutS002695chr5:25938098 -25938099unknown CDH10AutG10080 0 2 1
10 rs4327572 AutS000667chr5:26008577 -26008578unknown CDH9AutG10070 0 2 1
11 rs4307059 AutS000415chr5:26003459 -26003460unknown CDH9AutG10070 0 2 1
12 rs2030781 AutS001593chr7:110149993 -110149994intron IMMP2LAutG839430 0 1 2
13 rs1896731 AutS000782chr5:25934776 -25934777unknown CDH10AutG10080 0 2 1
14 rs7704909 AutS002690chr5:25934677 -25934678unknown CDH10AutG10080 0 2 1
15 rs167771 AutS002554chr3:115358964 -115358965intron DRD3AutG18140 1 0 2
16 rs12518194 AutS003264chr5:25987317 -25987318unknown CDH9AutG10070 0 2 1
17 rs1014531 AutS002039chr16:9763294 -9763295untranslated-3 GRIN2AAutG29031 0 0 2
18 rs4327572 AutS002677chr5:26008577 -26008578unknown CDH10AutG10080 0 2 1
19 rs11978485 AutS002546chr7:122480366 -122480367unknown SLC13A1AutG65610 0 1 2
20 rs2171493 AutS000739chr7:129693382 -129693383near-gene-5 CPA2AutG13580 0 2 1
21 rs10038113 AutS002064chr5:25938098 -25938099unknown CDH9AutG10070 0 2 1
22 rs4307059 AutS003276chr5:26003459 -26003460unknown CDH10AutG10080 0 2 1
23 rs11768465 AutS002850chr7:100036321 -100036322near-gene-5,missense FBXO24AutG262610 0 2 1
24 rs1896731 AutS002970chr5:25934776 -25934777unknown CDH9AutG10070 0 2 1
25 rs12897470 AutS001425chr14:39895589 -39895590unknown FBXO33AutG2541700 0 1 1

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Syndromic Genes

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AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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