AutismKB

View SNPs/VNTRs


View by Chromosome: All( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: near-gene-5( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )



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SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs1858830 AutS003175chr7:116099674 -116099675near-gene-5 METAutG42338 5 0 0
2 rs6311 AutS002459chr13:46369478 -46369479near-gene-5 HTR2AAutG33563 1 0 0
3 rs11768465 AutS002850chr7:100036321 -100036322near-gene-5,missense FBXO24AutG262610 0 2 1
4 rs2171493 AutS000739chr7:129693382 -129693383near-gene-5 CPA2AutG13580 0 2 1
5 rs2317385 AutS000101chr17:42684680 -42684681near-gene-5 ITGB3AutG36903 0 0 0
6 rs3763463 AutS003154chr7:107884726 -107884727near-gene-5 NRCAMAutG48972 1 0 0
7 rs3735520 AutS001401chr7:81238874 -81238875near-gene-5 HGFAutG30822 0 0 0
8 rs2049046 AutS003057chr11:27680350 -27680351intron,near-gene-5 BDNFAutG6271 1 0 0
9 rs344781 AutS002017chr19:48866627 -48866628near-gene-5 PLAURAutG53291 1 0 0
10 rs20317 AutS001086chr15:24570029 -24570030near-gene-5 GABRB3AutG25622 0 0 0
11 rs13151759 AutS001302chr4:46690409 -46690410near-gene-5 GABRA4AutG25572 0 0 0
12 rs2020917 AutS000517chr22:18308883 -18308884intron,near-gene-5 COMTAutG13121 1 0 0
13 rs7950390 AutS000085chr11:4587927 -4587928near-gene-5 TRIM68AutG551280 2 0 0
14 rs1630250 AutS000086chr1:229730825 -229730826near-gene-5,missense DISC1AutG271852 0 0 0
15 rs3762555 AutS001835chr2:171380640 -171380641near-gene-5 GAD1AutG25712 0 0 0
16 rs11568817 AutS003378chr6:78230100 -78230101near-gene-5 HTR1BAutG33511 1 0 0
17 rs988748 AutS000368chr11:27681320 -27681321intron,near-gene-5 BDNFAutG6271 1 0 0
18 rs3755827 AutS001165chr3:62335410 -62335411near-gene-5 FEZF2AutG550790 0 1 1
19 rs829957 AutS002738chr2:169367079 -169367080near-gene-5 NOSTRINAutG1156770 0 1 1
20 rs13151769 AutS002109chr4:46690416 -46690417near-gene-5 GABRA4AutG25572 0 0 0
21 rs2030974 AutS000547chr7:129693118 -129693119near-gene-5 CPA2AutG13580 0 1 1
22 rs130058 AutS001639chr6:78229999 -78230000near-gene-5 HTR1BAutG33511 1 0 0
23 rs409969 AutS002772chr7:107584853 -107584854intron,near-gene-5 NRCAMAutG48971 1 0 0
24 rs3791878 AutS003116chr2:171380436 -171380437near-gene-5 GAD1AutG25712 0 0 0
25 rs1207735 AutS002600chr7:96493661 -96493662near-gene-5 DLX5AutG17492 0 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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