AutismKB

View SNPs/VNTRs


View by Chromosome: All( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: missense( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )



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SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs10951154 AutS003002chr7:27101838 -27101839missense HOXA1AutG31987 7 0 0
2 rs1801133 AutS002048chr1:11778964 -11778965missense MTHFRAutG45240 5 0 0
3 rs3735653 AutS000293chr7:154944193 -154944194missense EN2AutG20204 0 0 0
4 rs821616 AutS000578chr1:230211220 -230211221missense DISC1AutG271853 1 0 0
5 rs5918 AutS002009chr17:42715728 -42715729missense ITGB3AutG36904 0 0 0
6 rs3738401 AutS000679chr1:229896917 -229896918missense DISC1AutG271852 1 0 0
7 rs6314 AutS002936chr13:46307034 -46307035missense HTR2AAutG33562 1 0 0
8 rs362691 AutS000048chr7:103038396 -103038397missense RELNAutG56492 1 0 0
9 rs11768465 AutS002850chr7:100036321 -100036322near-gene-5,missense FBXO24AutG262610 0 2 1
10 rs6958498 AutS003357chr7:107621848 -107621849missense NRCAMAutG48972 1 0 0
11 rs11080149 AutS002389chr17:26647413 -26647414intron,missense OMGAutG49741 2 0 0
12 rs12620556 AutS001456chr2:158905016 -158905017missense CCDC148AutG1309400 0 2 1
13 rs2066703 AutS001930chr15:23513150 -23513151missense ATP10AAutG571943 0 0 0
14 rs73598374 AutS000334chr20:42713640 -42713641missense ADAAutG1002 1 0 0
15 rs1799972 AutS000630chr6:154402388 -154402389missense OPRM1AutG49880 0 0 2
16 rs9349688 AutS002894chr6:53870050 -53870051missense LRRC1AutG552270 0 1 1
17 rs2229940 AutS003222chr4:46690122 -46690123missense GABRA4AutG25572 0 0 0
18 rs854560 AutS001225chr7:94784019 -94784020coding-synon,missense PON1AutG54441 1 0 0
19 rs8179183 AutS002191chr1:65848539 -65848540missense LEPRAutG39530 0 0 2
20 rs2066704 AutS003148chr15:23504534 -23504535missense ATP10AAutG571942 0 0 0
21 rs1174657 AutS001491chr1:181883548 -181883549intron,missense APOBEC4AutG4033140 0 2 0
22 rs4150167 AutS000337chr16:82771184 -82771185missense TAF1CAutG90130 0 2 0
23 rs6675281 AutS003331chr1:230020723 -230020724missense DISC1AutG271852 0 0 0
24 rs6318 AutS001451chrX:113871990 -113871991missense HTR2CAutG33581 1 0 0
25 rs892055 AutS002329chr19:43604603 -43604604missense RASGRP4AutG1157270 0 2 0

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Syndromic Genes

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AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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