AutismKB

View SNPs/VNTRs


View by Chromosome: All( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:Mixed( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )



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SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs2056202 AutS002947chr2:172420725 -172420726intron SLC25A12AutG860410 1 0 0
2 rs1861972 AutS001439chr7:154946753 -154946754intron EN2AutG20207 2 0 0
3 rs1861973 AutS002752chr7:154946905 -154946906intron EN2AutG20206 2 0 0
4 rs4141463 AutS002502chr20:14695470 -14695471intron MACROD2AutG1407330 5 2 0
5 rs2254298 AutS000320chr3:8777227 -8777228intron OXTRAutG50215 1 0 0
6 rs38845 AutS001168chr7:116109037 -116109038intron METAutG42334 1 0 0
7 rs2268495 AutS001979chr3:8782534 -8782535intron OXTRAutG50213 1 0 0
8 rs2268490 AutS000891chr3:8772084 -8772085intron OXTRAutG50212 0 0 2
9 rs2301261 AutS000543chr3:8785895 -8785896intron OXTRAutG50211 1 0 2
10 rs237887 AutS002696chr3:8772041 -8772042intron OXTRAutG50213 1 0 0
11 rs11080149 AutS002389chr17:26647413 -26647414intron,missense OMGAutG49741 2 0 0
12 rs73598374 AutS000334chr20:42713640 -42713641missense ADAAutG1002 1 0 0
13 rs1014531 AutS002039chr16:9763294 -9763295untranslated-3 GRIN2AAutG29031 0 0 2
14 rs4668331 AutS002042chr2:171414492 -171414493intron GAD1AutG25712 1 0 0
15 rs2268491 AutS000260chr3:8775397 -8775398intron OXTRAutG50212 1 0 0
16 rs7794745 AutS003061chr7:146120538 -146120539intron CNTNAP2AutG260471 0 2 0
17 rs2024233 AutS000703chr7:116704662 -116704663untranslated-3 WNT2AutG74722 1 0 0
18 rs130075 AutS001837chr6_qbl_hap2:2372282 -2372283unknown HTR1BAutG33511 1 0 0
19 rs2300045 AutS000053chr7:107850473 -107850474intron NRCAMAutG48971 1 0 0
20 rs1269642 AutS002508chr7:107674714 -107674715intron NRCAMAutG48971 1 0 0
21 rs12666974 AutS000672chr7:122979209 -122979210intron NDUFA5AutG46981 1 0 0
22 rs2020917 AutS000517chr22:18308883 -18308884intron,near-gene-5 COMTAutG13121 1 0 0
23 rs409969 AutS002772chr7:107584853 -107584854intron,near-gene-5 NRCAMAutG48971 1 0 0
24 rs3823674 AutS001434chr7:50539489 -50539490intron DDCAutG16441 1 0 0
25 rs1800656 AutS001027chr7:125864940 -125864941unknown GRM8AutG29181 1 0 0

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Syndromic Genes

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AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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