AutismKB

View SNPs/VNTRs


View by Chromosome: 9( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )


SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs4742409 AutS000685chr9:7764179 -7764180unknown KDM4CAutG230810 0 2 0
2 rs301430 AutS001867chr9:4566679 -4566680coding-synon SLC1A1AutG65051 1 0 0
3 rs1929402 AutS003164chr9:80052907 -80052908intron CEP78AutG841310 0 2 0
4 rs952834 AutS003095chr9:88431596 -88431597unknown GAS1AutG26190 0 2 0
5 rs4742409 AutS002261chr9:7764179 -7764180unknown PTPRDAutG57890 0 2 0
6 rs301979 AutS000602chr9:4566850 -4566851intron SLC1A1AutG65051 1 0 0
7 rs2073837 AutS001970chr9:135512748 -135512749intron DBHAutG16212 0 0 0
8 rs952834 AutS002711chr9:88431596 -88431597unknown ZCCHC6AutG796700 0 2 0
9 rs301434 AutS002469chr9:4572081 -4572082intron SLC1A1AutG65051 0 0 0
10 rs2073833 AutS001031chr9:135510102 -135510103intron DBHAutG16211 0 0 0
11 rs1108581 AutS002359chr9:135495061 -135495062intron DBHAutG16211 0 0 0
12 rs2297172 AutS002188chr9:71563165 -71563166intron PTAR1AutG3757430 1 0 0
13 rs2797849 AutS000490chr9:135491761 -135491762intron DBHAutG16211 0 0 0
14 rs2228622 AutS002047chr9:4554431 -4554432coding-synon SLC1A1AutG65050 1 0 0
15 rs893584 AutS000416chr9:86480811 -86480812intron NTRK2AutG49151 0 0 0
16 rs1187352 AutS001706chr9:86483276 -86483277intron NTRK2AutG49151 0 0 0
17 rs4578034 AutS001620chr9:86777601 -86777602intron NTRK2AutG49151 0 0 0
18 rs1211166 AutS001238chr9:86475811 -86475812intron NTRK2AutG49151 0 0 0
19 rs12682807 AutS002498chr9:4564021 -4564022intron SLC1A1AutG65050 1 0 0
20 rs1471786 AutS001127chr9:4566773 -4566774intron SLC1A1AutG65050 1 0 0
21 rs2519148 AutS002447chr9:135484386 -135484387unknown DBHAutG16211 0 0 0
22 rs722628 AutS001005chr9:7136887 -7136888intron KDM4CAutG230810 1 0 0
23 rs2797853 AutS002175chr9:135502335 -135502336intron DBHAutG16211 0 0 0
24 rs11141292 AutS000478chr9:87987216 -87987217unknown ATP10AAutG571941 0 0 0
25 rs1611115 AutS000023chr9:135490335 -135490336near-gene-5 DBHAutG16211 0 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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