AutismKB

View SNPs/VNTRs


View by Chromosome: 7( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: missense( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )


SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs10951154 AutS003002chr7:27101838 -27101839missense HOXA1AutG31987 7 0 0
2 rs3735653 AutS000293chr7:154944193 -154944194missense EN2AutG20204 0 0 0
3 rs362691 AutS000048chr7:103038396 -103038397missense RELNAutG56492 1 0 0
4 rs11768465 AutS002850chr7:100036321 -100036322near-gene-5,missense FBXO24AutG262610 0 2 1
5 rs6958498 AutS003357chr7:107621848 -107621849missense NRCAMAutG48972 1 0 0
6 rs854560 AutS001225chr7:94784019 -94784020coding-synon,missense PON1AutG54441 1 0 0
7 rs1130496 AutS000895chr7:157652655 -157652656missense PTPRN2AutG57990 0 1 0
8 rs5745687 AutS000921chr7:81196986 -81196987missense HGFAutG30821 0 0 0
9 rs1043895 AutS001001chr7:107612199 -107612200missense NRCAMAutG48971 0 0 0
10 rs976714 AutS001169chr7:82419794 -82419795missense DLX6AutG17501 0 0 0
11 rs6090 AutS001616chr7:100558442 -100558443missense SERPINE1AutG50541 0 0 0
12 rs33917957 AutS001996chr7:116127497 -116127498missense METAutG42331 0 0 0
13 rs34589476 AutS002073chr7:116199158 -116199159missense METAutG42331 0 0 0
14 rs35776110 AutS002391chr7:116127332 -116127333missense METAutG42331 0 0 0
15 rs9690688 AutS002505chr7:107507397 -107507398missense LAMB4AutG227980 0 1 0
16 rs2229860 AutS000272chr7:102993062 -102993063missense RELNAutG56491 0 0 0
17 rs662 AutS000307chr7:94775381 -94775382missense PON1AutG54440 1 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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