AutismKB

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View by Chromosome: 7( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )


SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs10951154 AutS003002chr7:27101838 -27101839missense HOXA1AutG31987 7 0 0
2 rs1858830 AutS003175chr7:116099674 -116099675near-gene-5 METAutG42338 5 0 0
3 rs1861972 AutS001439chr7:154946753 -154946754intron EN2AutG20207 2 0 0
4 rs1861973 AutS002752chr7:154946905 -154946906intron EN2AutG20206 2 0 0
5 rs38845 AutS001168chr7:116109037 -116109038intron METAutG42334 1 0 0
6 rs4363087 AutS001195chr7:72756131 -72756132intron STX1AAutG68045 0 0 0
7 rs3793243 AutS001284chr7:72759282 -72759283intron STX1AAutG68045 0 0 0
8 rs736707 AutS000076chr7:102917638 -102917639intron RELNAutG56493 1 0 0
9 rs10258862 AutS000145chr7:39083322 -39083323intron POU6F2AutG112810 0 4 0
10 rs3735653 AutS000293chr7:154944193 -154944194missense EN2AutG20204 0 0 0
11 rs2217262 AutS001186chr7:111583612 -111583613intron DOCK4AutG97320 0 2 2
12 rs722519 AutS002223chr7:107813778 -107813779intron NRCAMAutG48972 1 0 0
13 rs941298 AutS002363chr7:72763198 -72763199intron STX1AAutG68043 0 0 0
14 rs11978485 AutS002546chr7:122480366 -122480367unknown SLC13A1AutG65610 0 1 2
15 rs12537269 AutS000036chr7:110184782 -110184783intron IMMP2LAutG839430 0 1 2
16 rs362691 AutS000048chr7:103038396 -103038397missense RELNAutG56492 1 0 0
17 rs6951030 AutS000148chr7:72771176 -72771177intron STX1AAutG68043 0 0 0
18 rs437 AutS000273chr7:116084131 -116084132unknown METAutG42333 0 0 0
19 rs4717806 AutS000414chr7:72754412 -72754413intron STX1AAutG68043 0 0 0
20 rs867500 AutS000423chr7:72752375 -72752376untranslated-3 STX1AAutG68043 0 0 0
21 rs2024233 AutS000703chr7:116704662 -116704663untranslated-3 WNT2AutG74722 1 0 0
22 rs2171493 AutS000739chr7:129693382 -129693383near-gene-5 CPA2AutG13580 0 2 1
23 rs11768465 AutS002850chr7:100036321 -100036322near-gene-5,missense FBXO24AutG262610 0 2 1
24 rs7794745 AutS003061chr7:146120538 -146120539intron CNTNAP2AutG260471 0 2 0
25 rs3763463 AutS003154chr7:107884726 -107884727near-gene-5 NRCAMAutG48972 1 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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