AutismKB


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View SNPs/VNTRs


View by Chromosome: 6( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )


SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs2227281 AutS000576chr6:102609888 -102609889intron GRIK2AutG28983 0 0 0
2 rs2227283 AutS002270chr6:102610009 -102610010coding-synon GRIK2AutG28983 0 0 0
3 rs9395885 AutS001701chr6:53853435 -53853436intron LRRC1AutG552270 0 1 1
4 rs636433 AutS002581chr6:154494177 -154494178intron OPRM1AutG49880 0 0 2
5 rs130058 AutS001639chr6:78229999 -78230000near-gene-5 HTR1BAutG33511 1 0 0
6 rs4746 AutS002456chr6:38758605 -38758606missense GLO1AutG27391 1 0 0
7 rs9461347 AutS001447chr6:27384556 -27384557near-gene-3 POM121L2AutG940260 0 2 0
8 rs606148 AutS002384chr6:154477678 -154477679intron OPRM1AutG49880 0 0 2
9 rs995640 AutS002929chr6:102589540 -102589541intron GRIK2AutG28982 0 0 0
10 rs2226067 AutS002872chr6:147032737 -147032738intron C6orf103AutG797470 0 2 0
11 rs228440 AutS002168chr6:134941072 -134941073unknown HTR2CAutG33581 1 0 0
12 rs13208655 AutS001047chr6:15365717 -15365718intron JARID2AutG37200 0 2 0
13 rs9384952 AutS001870chr6:116066756 -116066757unknown HS3ST5AutG2225370 0 1 1
14 rs9384952 AutS000830chr6:116066756 -116066757unknown FRKAutG24440 0 1 1
15 rs9322069 AutS002607chr6:147015145 -147015146intron C6orf103AutG797470 0 2 0
16 rs7766973 AutS001744chr6:15376029 -15376030intron JARID2AutG37200 0 2 0
17 rs11568817 AutS003378chr6:78230100 -78230101near-gene-5 HTR1BAutG33511 1 0 0
18 rs1799972 AutS000630chr6:154402388 -154402389missense OPRM1AutG49880 0 0 2
19 rs9322447 AutS000552chr6:154466012 -154466013intron OPRM1AutG49880 0 0 2
20 rs10485057 AutS003257chr6:154454947 -154454948intron OPRM1AutG49880 0 0 2
21 rs11155089 AutS002445chr6:140220669 -140220670intron LOC100132735AutG1001327350 0 2 0
22 rs6296 AutS003142chr6:78228978 -78228979coding-synon HTR1BAutG33511 1 0 0
23 rs9349688 AutS002894chr6:53870050 -53870051missense LRRC1AutG552270 0 1 1
24 rs9390411 AutS001292chr6:147014765 -147014766intron C6orf103AutG797470 0 2 0
25 rs2148174 AutS001839chr6:90062643 -90062644intron GABRR2AutG25701 0 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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