AutismKB


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View SNPs/VNTRs


View by Chromosome: 5( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )


SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs10038113 AutS002064chr5:25938098 -25938099unknown CDH9AutG10070 0 2 1
2 rs12518194 AutS002520chr5:25987317 -25987318unknown CDH10AutG10080 0 2 1
3 rs4327572 AutS002677chr5:26008577 -26008578unknown CDH10AutG10080 0 2 1
4 rs4307059 AutS000415chr5:26003459 -26003460unknown CDH9AutG10070 0 2 1
5 rs4327572 AutS000667chr5:26008577 -26008578unknown CDH9AutG10070 0 2 1
6 rs7704909 AutS000709chr5:25934677 -25934678unknown CDH9AutG10070 0 2 1
7 rs1896731 AutS000782chr5:25934776 -25934777unknown CDH10AutG10080 0 2 1
8 rs7704909 AutS002690chr5:25934677 -25934678unknown CDH10AutG10080 0 2 1
9 rs10038113 AutS002695chr5:25938098 -25938099unknown CDH10AutG10080 0 2 1
10 rs1896731 AutS002970chr5:25934776 -25934777unknown CDH9AutG10070 0 2 1
11 rs7725785 AutS003067chr5:147882895 -147882896intron HTR4AutG33600 3 0 0
12 rs12518194 AutS003264chr5:25987317 -25987318unknown CDH9AutG10070 0 2 1
13 rs4307059 AutS003276chr5:26003459 -26003460unknown CDH10AutG10080 0 2 1
14 rs1862242 AutS000978chr5:170165839 -170165840intron GABRPAutG25682 0 0 0
15 rs10513025 AutS001446chr5:9676621 -9676622unknown TAS2R1AutG508340 0 2 0
16 rs10513025 AutS000612chr5:9676621 -9676622unknown SEMA5AAutG90370 0 2 0
17 rs404375 AutS000729chr5:79384514 -79384515intron THBS4AutG70600 0 2 0
18 rs6872664 AutS003272chr5:134395496 -134395497intron PITX1AutG53072 0 0 0
19 rs6295 AutS002742chr5:63294320 -63294321near-gene-5 HTR1AAutG33501 0 0 0
20 rs1801394 AutS002839chr5:7923972 -7923973near-gene-5,missense MTRRAutG45520 1 0 0
21 rs7700313 AutS002849chr5:134396298 -134396299intron PITX1AutG53071 0 0 0
22 rs3805663 AutS002923chr5:134394098 -134394099intron PITX1AutG53071 0 0 0
23 rs2277049 AutS002937chr5:147883280 -147883281intron HTR4AutG33600 1 0 0
24 rs1042714 AutS002995chr5:148186665 -148186666missense ADRB2AutG1541 0 0 0
25 rs37370 AutS003019chr5:35075242 -35075243missense PRLRAutG56181 0 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
  • Click to Download Data

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