AutismKB

View SNPs/VNTRs


View by Chromosome: 2( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:Case control( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )


SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs2056202 AutS002947chr2:172420725 -172420726intron SLC25A12AutG860410 1 0 0
2 rs2292813 AutS001264chr2:172352474 -172352475intron SLC25A12AutG86049 1 0 0
3 rs4668331 AutS002042chr2:171414492 -171414493intron GAD1AutG25712 1 0 0
4 rs2241165 AutS002761chr2:171386624 -171386625intron GAD1AutG25711 1 0 0
5 rs1827924 AutS003253chr2:228377978 -228377979unknown CCL20AutG63640 2 0 0
6 rs1978340 AutS000165chr2:171378366 -171378367unknown GAD1AutG25710 1 0 0
7 rs4669330 AutS000927chr2:8744200 -8744201unknown ID2AutG33980 1 0 0
8 rs769395 AutS001412chr2:171425048 -171425049untranslated-3 GAD1AutG25710 1 0 0
9 rs3749034 AutS001471chr2:171381720 -171381721untranslated-5 GAD1AutG25710 1 0 0
10 rs701492 AutS001636chr2:171410725 -171410726intron GAD1AutG25710 1 0 0
11 rs2270335 AutS001805chr2:171382941 -171382942intron GAD1AutG25710 1 0 0
12 rs769390 AutS001971chr2:171401700 -171401701intron GAD1AutG25710 1 0 0
13 rs11542313 AutS002840chr2:171386870 -171386871coding-synon GAD1AutG25710 1 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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