AutismKB

View SNPs/VNTRs


View by Chromosome: 19( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )



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SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs4803455 AutS002531chr19:46543348 -46543349intron TGFB1AutG70401 0 2 0
2 rs344781 AutS002017chr19:48866627 -48866628near-gene-5 PLAURAutG53291 1 0 0
3 rs2392794 AutS001308chr19:423148 -423149intron ODF3L2AutG2844510 0 2 0
4 rs11671930 AutS000878chr19:8023307 -8023308near-gene-5 CCL25AutG63700 2 0 0
5 rs892055 AutS002329chr19:43604603 -43604604missense RASGRP4AutG1157270 0 2 0
6 rs3745734 AutS002540chr19:53826199 -53826200intron DBPAutG16281 0 0 0
7 rs4760 AutS000182chr19:48844939 -48844940intron,missense PLAURAutG53291 0 0 0
8 rs3848543 AutS002464chr19:53833343 -53833344intron,near-gene-3 DBPAutG16281 0 0 0
9 rs1800469 AutS002317chr19:46552135 -46552136near-gene-3 TGFB1AutG70401 0 0 0
10 rs7256242 AutS001625chr19:50671274 -50671275unknown FOSBAutG23541 0 0 0
11 rs344783 AutS002932chr19:48864027 -48864028intron PLAURAutG53291 0 0 0
12 rs397374 AutS000776chr19:48855620 -48855621intron PLAURAutG53291 0 0 0
13 rs344780 AutS002771chr19:48869706 -48869707unknown PLAURAutG53291 0 0 0
14 rs2239372 AutS000321chr19:48854793 -48854794intron PLAURAutG53291 0 0 0
15 rs8179181 AutS000098chr19:46530045 -46530046intron TGFB1AutG70401 0 0 0
16 rs386551 AutS002051chr19:53830097 -53830098intron DBPAutG16281 0 0 0
17 rs2241715 AutS001899chr19:46548725 -46548726intron TGFB1AutG70401 0 0 0
18 rs2276469 AutS001565chr19:50666432 -50666433intron FOSBAutG23541 0 0 0
19 rs344772 AutS000999chr19:48871795 -48871796unknown PLAURAutG53291 0 0 0
20 rs12972892 AutS000827chr19:50674212 -50674213unknown FOSBAutG23541 0 0 0
21 rs550455 AutS002785chr19:53828326 -53828327intron DBPAutG16281 0 0 0
22 rs1049739 AutS000624chr19:50670214 -50670215untranslated-3 FOSBAutG23541 0 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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