AutismKB

View SNPs/VNTRs


View by Chromosome: 16( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: intron( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )


SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs1873423 AutS001800chr16:23878177 -23878178intron PRKCBAutG55793 0 0 0
2 rs196002 AutS000873chr16:23870737 -23870738intron PRKCBAutG55793 0 0 0
3 rs3785387 AutS001715chr16:23869793 -23869794intron PRKCBAutG55793 0 0 0
4 rs4782041 AutS001323chr16:9924404 -9924405intron GRIN2AAutG29030 0 0 2
5 rs205409 AutS001553chr16:27971448 -27971449intron GSG1LAutG1463950 0 2 0
6 rs169143 AutS000055chr16:24044948 -24044949intron PRKCBAutG55792 0 0 0
7 rs1362319 AutS000132chr16:9777586 -9777587intron GRIN2AAutG29030 0 0 2
8 rs1875209 AutS000173chr16:9945554 -9945555intron GRIN2AAutG29030 0 0 2
9 rs182068 AutS000259chr16:24042183 -24042184intron PRKCBAutG55792 0 0 0
10 rs2602431 AutS000780chr16:79628197 -79628198intron ATMINAutG233000 0 2 0
11 rs9932538 AutS000781chr16:19116069 -19116070intron SYT17AutG517600 0 1 1
12 rs17284809 AutS001788chr16:15730300 -15730301intron MYH11AutG46290 0 2 0
13 rs198182 AutS002052chr16:24039885 -24039886intron PRKCBAutG55792 0 0 0
14 rs10492827 AutS002457chr16:9776258 -9776259intron GRIN2AAutG29030 0 0 2
15 rs3785392 AutS003084chr16:23851983 -23851984intron PRKCBAutG55792 0 0 0
16 rs2267770 AutS003122chr16:9773459 -9773460intron GRIN2AAutG29030 0 0 2
17 rs2051684 AutS002687chr16:24078475 -24078476intron PRKCBAutG55791 0 0 0
18 rs9935118 AutS002692chr16:23001528 -23001529intron USP31AutG574781 0 0 0
19 rs1507030 AutS002718chr16:7551156 -7551157intron RBFOX1AutG547151 0 0 0
20 rs7194291 AutS002729chr16:19520174 -19520175intron C16orf62AutG570201 0 0 0
21 rs9938513 AutS002755chr16:19567122 -19567123intron C16orf62AutG570201 0 0 0
22 rs12928700 AutS002764chr16:23783077 -23783078intron PRKCBAutG55791 0 0 0
23 rs1021385 AutS002765chr16:23942078 -23942079intron PRKCBAutG55791 0 0 0
24 rs12920797 AutS002775chr16:20890602 -20890603intron DNAH3AutG555671 0 0 0
25 rs7200119 AutS002794chr16:19393918 -19393919intron TMC5AutG798381 0 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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