AutismKB

View SNPs/VNTRs


View by Chromosome: 15( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: near-gene-5( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )


SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs20317 AutS001086chr15:24570029 -24570030near-gene-5 GABRB3AutG25622 0 0 0
2 rs4778109 AutS002830chr15:25398194 -25398195near-gene-5 GABRG3AutG25670 1 0 0
3 rs34146883 AutS001136chr15:20384417 -20384418near-gene-5 TUBGCP5AutG1147910 1 0 0
4 rs1041933 AutS001163chr15:23205841 -23205842intron,near-gene-5 UBE3AAutG73371 0 0 0
5 rs12441116 AutS001495chr15:22651432 -22651433intron,near-gene-5 SNRPNAutG66380 1 0 0
6 rs140676 AutS001603chr15:25399267 -25399268near-gene-5 GABRG3AutG25671 0 0 0
7 rs1004818 AutS001846chr15:28085112 -28085113near-gene-5 TJP1AutG70820 1 0 0
8 rs20318 AutS001906chr15:24569889 -24569890coding-synon,near-gene-5 GABRB3AutG25621 0 0 0
9 rs25409 AutS002319chr15:24569933 -24569934near-gene-5,missense GABRB3AutG25621 0 0 0
10 rs2076749 AutS002587chr15:23660227 -23660228near-gene-5 ATP10AAutG571941 0 0 0
11 rs8179184 AutS000154chr15:24570694 -24570695near-gene-5 GABRB3AutG25620 1 0 0
12 rs220030 AutS000437chr15:22750860 -22750861intron,near-gene-5 SNRPNAutG66381 0 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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