AutismKB

View SNPs/VNTRs


View by Chromosome: 15( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )



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SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs2081648 AutS003045chr15:24349291 -24349292intron GABRB3AutG25624 0 0 0
2 rs890317 AutS000079chr15:24473293 -24473294intron GABRB3AutG25623 1 0 0
3 rs140679 AutS000240chr15:25446270 -25446271coding-synon GABRG3AutG25674 0 0 0
4 rs1426217 AutS001389chr15:24372217 -24372218intron GABRB3AutG25624 0 0 0
5 rs140683 AutS001882chr15:24771080 -24771081intron GABRA5AutG25583 0 0 0
6 rs2066703 AutS001930chr15:23513150 -23513151missense ATP10AAutG571943 0 0 0
7 rs2066705 AutS002417chr15:23488096 -23488097intron ATP10AAutG571942 1 0 0
8 rs754185 AutS002584chr15:24438971 -24438972intron GABRB3AutG25623 0 0 0
9 rs7172534 AutS000171chr15:24855744 -24855745intron GABRG3AutG25673 0 0 0
10 rs140685 AutS000429chr15:24771204 -24771205coding-synon GABRA5AutG25582 1 0 0
11 rs897173 AutS002881chr15:25052646 -25052647intron GABRG3AutG25673 0 0 0
12 rs208129 AutS003303chr15:25007652 -25007653intron GABRG3AutG25673 0 0 0
13 rs2059574 AutS001628chr15:24548135 -24548136intron GABRB3AutG25622 1 0 0
14 rs140674 AutS001685chr15:25156713 -25156714coding-synon GABRG3AutG25673 0 0 0
15 rs1446240 AutS001012chr15:57083782 -57083783intron RNF111AutG547780 0 2 0
16 rs20317 AutS001086chr15:24570029 -24570030near-gene-5 GABRB3AutG25622 0 0 0
17 rs28564251 AutS001088chr15:25161850 -25161851intron GABRG3AutG25671 1 0 0
18 rs7179456 AutS001156chr15:56961830 -56961831intron SLTMAutG798110 0 2 0
19 rs28431127 AutS001157chr15:24833417 -24833418intron GABRG3AutG25671 1 0 0
20 rs878960 AutS001174chr15:24480028 -24480029intron GABRB3AutG25622 0 0 0
21 rs1047700 AutS001253chr15:23475631 -23475632coding-synon ATP10AAutG571942 0 0 0
22 rs1345098 AutS001610chr15:23608714 -23608715intron ATP10AAutG571942 0 0 0
23 rs12903690 AutS001743chr15:40402596 -40402597intron GANCAutG25950 0 2 0
24 rs140675 AutS001786chr15:25156861 -25156862intron GABRG3AutG25672 0 0 0
25 rs6606891 AutS000447chr15:25087881 -25087882intron GABRG3AutG25672 0 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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