AutismKB

View SNPs/VNTRs


View by Chromosome: 14( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )



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SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs7142002 AutS000038chr14:101430497 -101430498intron PPP2R5CAutG55270 0 2 0
2 rs12897470 AutS001425chr14:39895589 -39895590unknown FBXO33AutG2541700 0 1 1
3 rs12897470 AutS001226chr14:39895589 -39895590unknown LRFN5AutG1455810 0 1 1
4 rs11624358 AutS000920chr14:46563201 -46563202intron MDGA2AutG1613570 0 2 0
5 rs17783432 AutS000519chr14:76141160 -76141161unknown VASH1AutG228460 0 1 1
6 rs7147817 AutS001819chr14:39901753 -39901754unknown FBXO33AutG2541700 0 1 1
7 rs17783432 AutS000018chr14:76141160 -76141161unknown ESRRBAutG21030 0 1 1
8 rs7147817 AutS003342chr14:39901753 -39901754unknown LRFN5AutG1455810 0 1 1
9 rs11844366 AutS000367chr14:23111463 -23111464intron JPH4AutG845020 0 2 0
10 rs3783641 AutS002121chr14:54429888 -54429889intron GCH1AutG26431 0 0 0
11 rs17738966 AutS001084chr14:54371968 -54371969unknown GCH1AutG26430 1 0 0
12 rs160472 AutS000783chr14:58185200 -58185201near-gene-3 DACT1AutG513390 1 0 0
13 rs9671371 AutS000391chr14:54398384 -54398385intron GCH1AutG26431 0 0 0
14 rs1271572 AutS002528chr14:63831669 -63831670intron,near-gene-5 ESR2AutG21000 1 0 0
15 rs17832998 AutS000358chr14:58182484 -58182485missense,untranslated-5 DACT1AutG513390 1 0 0
16 rs10129645 AutS001232chr14:36928582 -36928583intron MIPOL1AutG1452820 0 1 0
17 rs3783638 AutS001141chr14:54418122 -54418123intron GCH1AutG26431 0 0 0
18 rs1152582 AutS001006chr14:63762382 -63762383untranslated-3 ESR2AutG21000 1 0 0
19 rs167481 AutS000854chr14:58178430 -58178431intron DACT1AutG513390 1 0 0
20 rs10133662 AutS000686chr14:54386019 -54386020intron GCH1AutG26431 0 0 0
21 rs863091 AutS000476chr14:58182227 -58182228coding-synon,untranslated-5 DACT1AutG513390 1 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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