AutismKB

View SNPs/VNTRs


View by Chromosome: 13( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )


SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs6313 AutS001230chr13:46367940 -46367941coding-synon HTR2AAutG33564 1 0 0
2 rs6311 AutS002459chr13:46369478 -46369479near-gene-5 HTR2AAutG33563 1 0 0
3 rs6314 AutS002936chr13:46307034 -46307035missense HTR2AAutG33562 1 0 0
4 rs4771633 AutS000981chr13:108858787 -108858788unknown MYO16AutG230260 0 1 1
5 rs9521337 AutS000738chr13:108823636 -108823637unknown MYO16AutG230260 0 1 1
6 rs9521354 AutS001660chr13:108865124 -108865125unknown MYO16AutG230260 0 1 1
7 rs1328244 AutS001407chr13:108881898 -108881899unknown MYO16AutG230260 0 1 1
8 rs9521355 AutS000417chr13:108865182 -108865183unknown MYO16AutG230260 0 1 1
9 rs7996916 AutS001568chr13:108855627 -108855628unknown MYO16AutG230260 0 1 1
10 rs1328250 AutS001269chr13:108856631 -108856632unknown MYO16AutG230260 0 1 1
11 rs4771632 AutS001193chr13:108846742 -108846743unknown MYO16AutG230260 0 1 1
12 rs7997977 AutS000533chr13:46368266 -46368267near-gene-5 HTR2AAutG33561 0 0 0
13 rs2770296 AutS000248chr13:46338560 -46338561intron HTR2AAutG33561 0 0 0
14 rs36213156 AutS002698chr13:46369798 -46369799near-gene-5 HTR2AAutG33561 0 0 0
15 rs1923882 AutS000983chr13:46309661 -46309662intron HTR2AAutG33561 0 0 0
16 rs9301030 AutS000880chr13:104924308 -104924309intron DAOAAutG2670121 0 0 0
17 rs701567 AutS000592chr13:104939995 -104939996intron DAOAAutG2670121 0 0 0

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Syndromic Genes

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AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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