AutismKB

View SNPs/VNTRs


View by Chromosome: 12( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:Case control( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )


SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs4760816 AutS001496chr12:70658867 -70658868intron TPH2AutG1212783 1 0 0
2 rs4341581 AutS002155chr12:70621339 -70621340intron TPH2AutG1212781 2 0 0
3 rs1048230 AutS002875chr12:49672332 -49672333coding-synon CHMP2BAutG259781 1 0 0
4 rs6253 AutS002189chr12:28007207 -28007208intron,untranslated-3 ARAutG3671 1 0 0
5 rs17110747 AutS002110chr12:70712220 -70712221untranslated-3 TPH2AutG1212780 2 0 0
6 rs17110566 AutS000747chr12:70652913 -70652914intron TPH2AutG1212780 2 0 0
7 rs4565946 AutS000510chr12:70623035 -70623036intron TPH2AutG1212781 1 0 0
8 rs1007023 AutS002547chr12:70674640 -70674641intron TPH2AutG1212781 1 0 0
9 rs11179000 AutS003238chr12:70624894 -70624895intron TPH2AutG1212781 1 0 0
10 rs11178998 AutS001256chr12:70618981 -70618982untranslated-5 TPH2AutG1212780 1 0 0
11 rs7397862 AutS003333chr12:65100753 -65100754intron GRIP1AutG234260 1 0 0
12 rs7963720 AutS003219chr12:70652452 -70652453intron TPH2AutG1212780 1 0 0
13 rs4290270 AutS000279chr12:70702501 -70702502coding-synon TPH2AutG1212780 1 0 0
14 rs7978692 AutS003023chr12:70652384 -70652385intron TPH2AutG1212780 1 0 0
15 rs10879348 AutS001709chr12:70652905 -70652906intron TPH2AutG1212780 1 0 0
16 rs7305115 AutS001373chr12:70659128 -70659129coding-synon TPH2AutG1212780 1 0 0
17 rs17110741 AutS000870chr12:70711276 -70711277intron TPH2AutG1212780 1 0 0
18 rs17840794 AutS000635chr12:70674358 -70674359intron TPH2AutG1212780 1 0 0
19 rs11615016 AutS000438chr12:70702260 -70702261intron TPH2AutG1212780 1 0 0
20 rs11179003 AutS003107chr12:70629553 -70629554intron TPH2AutG1212780 1 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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