AutismKB

View SNPs/VNTRs


View by Chromosome: 12( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: intron( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )


SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs4760816 AutS001496chr12:70658867 -70658868intron TPH2AutG1212783 1 0 0
2 rs10784941 AutS000792chr12:70622778 -70622779intron TPH2AutG1212783 0 0 0
3 rs4341581 AutS002155chr12:70621339 -70621340intron TPH2AutG1212781 2 0 0
4 rs4565946 AutS000510chr12:70623035 -70623036intron TPH2AutG1212781 1 0 0
5 rs2171363 AutS000393chr12:70646530 -70646531intron TPH2AutG1212782 0 0 0
6 rs1386492 AutS000278chr12:70648531 -70648532intron TPH2AutG1212782 0 0 0
7 rs1522307 AutS002355chr12:101822646 -101822647intron PAHAutG50532 0 0 0
8 rs1487278 AutS001240chr12:70687117 -70687118intron TPH2AutG1212782 0 0 0
9 rs6253 AutS002189chr12:28007207 -28007208intron,untranslated-3 ARAutG3671 1 0 0
10 rs17110566 AutS000747chr12:70652913 -70652914intron TPH2AutG1212780 2 0 0
11 rs11179000 AutS003238chr12:70624894 -70624895intron TPH2AutG1212781 1 0 0
12 rs1487280 AutS001962chr12:70705093 -70705094intron TPH2AutG1212782 0 0 0
13 rs11058197 AutS002971chr12:124534296 -124534297intron TMEM132BAutG1147950 0 2 0
14 rs10506645 AutS002640chr12:70671766 -70671767intron TPH2AutG1212782 0 0 0
15 rs1007023 AutS002547chr12:70674640 -70674641intron TPH2AutG1212781 1 0 0
16 rs1386494 AutS002288chr12:70638809 -70638810intron TPH2AutG1212782 0 0 0
17 rs17110741 AutS000870chr12:70711276 -70711277intron TPH2AutG1212780 1 0 0
18 rs1386486 AutS002215chr12:70698486 -70698487intron TPH2AutG1212781 0 0 0
19 rs7397862 AutS003333chr12:65100753 -65100754intron GRIP1AutG234260 1 0 0
20 rs2078074 AutS000745chr12:105960935 -105960936intron CRY1AutG14071 0 0 0
21 rs7963720 AutS003219chr12:70652452 -70652453intron TPH2AutG1212780 1 0 0
22 rs10879348 AutS001709chr12:70652905 -70652906intron TPH2AutG1212780 1 0 0
23 rs1861591 AutS000571chr12:105941056 -105941057intron CRY1AutG14071 0 0 0
24 rs7978692 AutS003023chr12:70652384 -70652385intron TPH2AutG1212780 1 0 0
25 rs12366827 AutS001576chr12:7834102 -7834103intron NANOGAutG799230 0 1 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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