AutismKB

View SNPs/VNTRs


View by Chromosome: 11( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )


SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs16910190 AutS000587chr11:22785181 -22785182intron GAS2AutG26200 0 2 0
2 rs3819331 AutS002132chr11:111604619 -111604620intron PTSAutG58052 0 0 0
3 rs16910194 AutS000847chr11:22785487 -22785488intron GAS2AutG26200 0 2 0
4 rs1550976 AutS000299chr11:130825279 -130825280intron NTMAutG508630 0 2 0
5 rs1448363 AutS000664chr11:130825399 -130825400intron NTMAutG508630 0 2 0
6 rs12293188 AutS001834chr11:22775949 -22775950intron GAS2AutG26200 0 2 0
7 rs1491851 AutS002379chr11:27709338 -27709339unknown BDNFAutG6271 1 0 0
8 rs7950390 AutS000085chr11:4587927 -4587928near-gene-5 TRIM68AutG551280 2 0 0
9 rs2049046 AutS003057chr11:27680350 -27680351intron,near-gene-5 BDNFAutG6271 1 0 0
10 rs2070762 AutS002748chr11:2142910 -2142911intron THAutG70542 0 0 0
11 rs988748 AutS000368chr11:27681320 -27681321intron,near-gene-5 BDNFAutG6271 1 0 0
12 rs6265 AutS003261chr11:27636491 -27636492missense BDNFAutG6271 1 0 0
13 rs552390 AutS001874chr11:17880021 -17880022intron TPH1AutG71661 0 0 0
14 rs4635093 AutS003171chr11:124264853 -124264854intron ROBO4AutG545381 0 0 0
15 rs2203877 AutS002390chr11:27627485 -27627486unknown BDNFAutG6271 0 0 0
16 rs1695 AutS000146chr11:67109264 -67109265missense GSTP1AutG29501 0 0 0
17 rs623580 AutS001043chr11:18020552 -18020553near-gene-5 TPH1AutG71661 0 0 0
18 rs727155 AutS003079chr11:27707024 -27707025unknown BDNFAutG6271 0 0 0
19 rs7925879 AutS000538chr11:124245900 -124245901intron ROBO3AutG642211 0 0 0
20 rs2290035 AutS001774chr11:13364346 -13364347intron ARNTLAutG4061 0 0 0
21 rs11030121 AutS002337chr11:27692782 -27692783intron BDNFAutG6271 0 0 0
22 rs172423 AutS000091chr11:18012800 -18012801intron TPH1AutG71661 0 0 0
23 rs7121775 AutS001026chr11:45820898 -45820899unknown CRY2AutG14081 0 0 0
24 rs1519479 AutS003064chr11:27624106 -27624107unknown BDNFAutG6271 0 0 0
25 rs2049045 AutS000531chr11:27650816 -27650817intron BDNFAutG6271 0 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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