AutismKB

View SNPs/VNTRs


View by Chromosome: 11( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )


SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs988748 AutS000368chr11:27681320 -27681321intron,near-gene-5 BDNFAutG6271 1 0 0
2 rs2070762 AutS002748chr11:2142910 -2142911intron THAutG70542 0 0 0
3 rs6265 AutS003261chr11:27636491 -27636492missense BDNFAutG6271 1 0 0
4 rs16910190 AutS000587chr11:22785181 -22785182intron GAS2AutG26200 0 2 0
5 rs16910194 AutS000847chr11:22785487 -22785488intron GAS2AutG26200 0 2 0
6 rs3819331 AutS002132chr11:111604619 -111604620intron PTSAutG58052 0 0 0
7 rs1550976 AutS000299chr11:130825279 -130825280intron NTMAutG508630 0 2 0
8 rs1448363 AutS000664chr11:130825399 -130825400intron NTMAutG508630 0 2 0
9 rs12293188 AutS001834chr11:22775949 -22775950intron GAS2AutG26200 0 2 0
10 rs1491851 AutS002379chr11:27709338 -27709339unknown BDNFAutG6271 1 0 0
11 rs7950390 AutS000085chr11:4587927 -4587928near-gene-5 TRIM68AutG551280 2 0 0
12 rs2049046 AutS003057chr11:27680350 -27680351intron,near-gene-5 BDNFAutG6271 1 0 0
13 rs1401417 AutS000720chr11:45836685 -45836686intron CRY2AutG14081 0 0 0
14 rs2000554 AutS001998chr11:88575588 -88575589intron TYRAutG72991 0 0 0
15 rs7120736 AutS001385chr11:124242840 -124242841intron ROBO3AutG642211 0 0 0
16 rs7951801 AutS000700chr11:124239937 -124239938near-gene-5 ROBO3AutG642211 0 0 0
17 rs877412 AutS001939chr11:45854226 -45854227intron CRY2AutG14081 0 0 0
18 rs7123206 AutS003363chr11:88590979 -88590980intron TYRAutG72991 0 0 0
19 rs11219817 AutS000343chr11:124242161 -124242162intron ROBO3AutG642211 0 0 0
20 rs908867 AutS001134chr11:27702339 -27702340unknown BDNFAutG6271 0 0 0
21 rs7124442 AutS002650chr11:27633616 -27633617untranslated-3 BDNFAutG6271 0 0 0
22 rs7111513 AutS000668chr11:124238586 -124238587near-gene-5 ROBO3AutG642211 0 0 0
23 rs10830963 AutS001921chr11:92348357 -92348358intron MTNR1BAutG45441 0 0 0
24 rs1401635 AutS000191chr11:27650566 -27650567intron BDNFAutG6271 0 0 0
25 rs3824872 AutS001100chr11:45862180 -45862181near-gene-5 CRY2AutG14081 0 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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