AutismKB

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View by Chromosome: 11( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )


SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs1550976 AutS000299chr11:130825279 -130825280intron NTMAutG508630 0 2 0
2 rs1448363 AutS000664chr11:130825399 -130825400intron NTMAutG508630 0 2 0
3 rs12293188 AutS001834chr11:22775949 -22775950intron GAS2AutG26200 0 2 0
4 rs1491851 AutS002379chr11:27709338 -27709339unknown BDNFAutG6271 1 0 0
5 rs7950390 AutS000085chr11:4587927 -4587928near-gene-5 TRIM68AutG551280 2 0 0
6 rs2049046 AutS003057chr11:27680350 -27680351intron,near-gene-5 BDNFAutG6271 1 0 0
7 rs988748 AutS000368chr11:27681320 -27681321intron,near-gene-5 BDNFAutG6271 1 0 0
8 rs2070762 AutS002748chr11:2142910 -2142911intron THAutG70542 0 0 0
9 rs6265 AutS003261chr11:27636491 -27636492missense BDNFAutG6271 1 0 0
10 rs16910190 AutS000587chr11:22785181 -22785182intron GAS2AutG26200 0 2 0
11 rs16910194 AutS000847chr11:22785487 -22785488intron GAS2AutG26200 0 2 0
12 rs3819331 AutS002132chr11:111604619 -111604620intron PTSAutG58052 0 0 0
13 rs2278749 AutS000511chr11:13354453 -13354454intron ARNTLAutG4061 0 0 0
14 rs2279287 AutS001561chr11:13255060 -13255061near-gene-5 ARNTLAutG4061 0 0 0
15 rs2155417 AutS003021chr11:124239495 -124239496near-gene-5 ROBO3AutG642211 0 0 0
16 rs10840070 AutS000751chr11:8524782 -8524783intron STK33AutG659750 0 1 0
17 rs6590109 AutS002087chr11:124264257 -124264258intron ROBO4AutG545381 0 0 0
18 rs11030104 AutS000454chr11:27641092 -27641093intron BDNFAutG6271 0 0 0
19 rs5017048 AutS001467chr11:124239680 -124239681near-gene-5 ROBO3AutG642211 0 0 0
20 rs7103411 AutS002851chr11:27656700 -27656701intron BDNFAutG6271 0 0 0
21 rs12419949 AutS000726chr11:88562110 -88562111intron TYRAutG72991 0 0 0
22 rs11219829 AutS002024chr11:124266015 -124266016intron ROBO4AutG545381 0 0 0
23 rs4606490 AutS000382chr11:124247940 -124247941intron ROBO3AutG642211 0 0 0
24 rs1150220 AutS001422chr11:113363095 -113363096intron HTR3AAutG33591 0 0 0
25 rs1491850 AutS002779chr11:27706300 -27706301unknown BDNFAutG6271 0 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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