AutismKB

View SNPs/VNTRs


View by Chromosome: 11( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )


SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs1491851 AutS002379chr11:27709338 -27709339unknown BDNFAutG6271 1 0 0
2 rs7950390 AutS000085chr11:4587927 -4587928near-gene-5 TRIM68AutG551280 2 0 0
3 rs2049046 AutS003057chr11:27680350 -27680351intron,near-gene-5 BDNFAutG6271 1 0 0
4 rs2070762 AutS002748chr11:2142910 -2142911intron THAutG70542 0 0 0
5 rs988748 AutS000368chr11:27681320 -27681321intron,near-gene-5 BDNFAutG6271 1 0 0
6 rs6265 AutS003261chr11:27636491 -27636492missense BDNFAutG6271 1 0 0
7 rs16910190 AutS000587chr11:22785181 -22785182intron GAS2AutG26200 0 2 0
8 rs3819331 AutS002132chr11:111604619 -111604620intron PTSAutG58052 0 0 0
9 rs16910194 AutS000847chr11:22785487 -22785488intron GAS2AutG26200 0 2 0
10 rs1550976 AutS000299chr11:130825279 -130825280intron NTMAutG508630 0 2 0
11 rs1448363 AutS000664chr11:130825399 -130825400intron NTMAutG508630 0 2 0
12 rs12293188 AutS001834chr11:22775949 -22775950intron GAS2AutG26200 0 2 0
13 rs623143 AutS000115chr11:17964951 -17964952intron TPH1AutG71661 0 0 0
14 rs1519480 AutS001029chr11:27632287 -27632288unknown BDNFAutG6271 0 0 0
15 rs11030096 AutS001719chr11:27622118 -27622119unknown BDNFAutG6271 0 0 0
16 rs4936957 AutS003070chr11:124245197 -124245198intron ROBO3AutG642211 0 0 0
17 rs3802905 AutS000535chr11:124254793 -124254794intron ROBO3AutG642211 0 0 0
18 rs11219830 AutS002219chr11:124266201 -124266202intron ROBO4AutG545381 0 0 0
19 rs925946 AutS000990chr11:27623777 -27623778unknown BDNFAutG6271 0 0 0
20 rs1982350 AutS001566chr11:13306706 -13306707intron ARNTLAutG4061 0 0 0
21 rs7934165 AutS000515chr11:27688558 -27688559intron BDNFAutG6271 0 0 0
22 rs1358054 AutS002091chr11:36163247 -36163248intron LDLRAD3AutG1434580 1 0 0
23 rs7127507 AutS000014chr11:27671459 -27671460intron BDNFAutG6271 0 0 0
24 rs7933420 AutS000785chr11:45853372 -45853373intron CRY2AutG14081 0 0 0
25 rs3923890 AutS001533chr11:124245619 -124245620intron ROBO3AutG642211 0 0 0

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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