AutismKB

View SNPs/VNTRs


View by Chromosome: 11( 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X  Y  All )


View by Study:All( FBAT  Case control  GWAS FBAT  GWAS case control  All  )


View by Results:All( Positive  Mixed  Negative  All  )


View by Function: All( coding-synon  missense  frameshift  intron  near-gene-3  near-gene-5  untranslated-3  untranslated-5  Unknown  All )


With SNP130 annotation: Yes( Yes  No  Both  )



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SNP Name SNP ID Location Function Gene Symbol Gene ID Related Studies Result
FBAT Case Control GWAS FBAT GWAS Case Control
1 rs1550976 AutS000299chr11:130825279 -130825280intron NTMAutG508630 0 2 0
2 rs1448363 AutS000664chr11:130825399 -130825400intron NTMAutG508630 0 2 0
3 rs12293188 AutS001834chr11:22775949 -22775950intron GAS2AutG26200 0 2 0
4 rs1491851 AutS002379chr11:27709338 -27709339unknown BDNFAutG6271 1 0 0
5 rs7950390 AutS000085chr11:4587927 -4587928near-gene-5 TRIM68AutG551280 2 0 0
6 rs2049046 AutS003057chr11:27680350 -27680351intron,near-gene-5 BDNFAutG6271 1 0 0
7 rs2070762 AutS002748chr11:2142910 -2142911intron THAutG70542 0 0 0
8 rs988748 AutS000368chr11:27681320 -27681321intron,near-gene-5 BDNFAutG6271 1 0 0
9 rs6265 AutS003261chr11:27636491 -27636492missense BDNFAutG6271 1 0 0
10 rs16910190 AutS000587chr11:22785181 -22785182intron GAS2AutG26200 0 2 0
11 rs3819331 AutS002132chr11:111604619 -111604620intron PTSAutG58052 0 0 0
12 rs16910194 AutS000847chr11:22785487 -22785488intron GAS2AutG26200 0 2 0
13 rs2189593 AutS002717chr11:17789008 -17789009intron TPH1AutG71661 0 0 0
14 rs11021927 AutS000347chr11:11533124 -11533125intron GALNTL4AutG3743780 0 1 0
15 rs718439 AutS001296chr11:17790782 -17790783intron TPH1AutG71661 0 0 0
16 rs12273363 AutS001923chr11:27701434 -27701435near-gene-5 BDNFAutG6271 0 0 0
17 rs4078483 AutS003274chr11:124271800 -124271801intron ROBO4AutG545381 0 0 0
18 rs7104934 AutS000692chr11:124261615 -124261616coding-synon ROBO4AutG545381 0 0 0
19 rs12364060 AutS002635chr11:45846350 -45846351intron CRY2AutG14081 0 0 0
20 rs2030324 AutS001131chr11:27683490 -27683491intron BDNFAutG6271 0 0 0
21 rs2292912 AutS001908chr11:45834263 -45834264intron CRY2AutG14081 0 0 0
22 rs4537731 AutS003255chr11:18025457 -18025458unknown TPH1AutG71661 0 0 0
23 rs1039205 AutS002466chr11:36668409 -36668410unknown LDLRAD3AutG1434580 1 0 0
24 rs1799913 AutS000166chr11:18003830 -18003831intron TPH1AutG71661 0 0 0
25 rs11219819 AutS001068chr11:124242539 -124242540intron ROBO3AutG642211 0 0 0

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Syndromic Genes

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AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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