AutismKB


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Detailed Information for rs6313

Basic Information
SNP Name:rs6313
SNP location:chr13:46367940-46367941
Related Gene:HTR2A
Function:coding-synon
Related Studies Statistic
FBATCase controlGWAS FBATGWAS case control
4 1 0 0
Low Scale Association Studies
Family Based Association Studies: 4 results 
Transmission Disequilibrium Test (TDT)
Results #Informative Families Alele Name Transmitted (frequency) Non-Transmitted (frequency) P valueStudy Information
- T
C
33 ( - )
34 ( - )
34 ( - )
33 ( - )
0.9Guhathakurta,2009_1
  • Ancestral: Asian
  • Country: India
  • Diagnosis criteria: DSM-IV, CARS
  • Final diagnosis: ASD
  • Family : Total Family: 120 Simplex Family: 120
  • Affected: All: 120 Women: 20 Age: 5.84 ± 2.96 Age Range: - IQ:- IQ Range:-
  • Unaffected: All:-
- C
T
- ( - )
- ( - )
- ( - )
- ( - )
0.9333Coutinho,2007_1
  • Ancestral: Caucasian
  • Country: Portugal
  • Diagnosis criteria: DSM-IV, ADI-R, CARS, IQ
  • Final diagnosis: AD
  • Family : Total Family: 186 Simplex Family: 186
  • Affected: All: 186 Women: - Age: 6.8 Age Range: (2-18) IQ:- IQ Range:-
  • Unaffected: All:
- C
T
69 ( - )
73 ( - )
73 ( - )
69 ( - )
0.737Cho,2007_1
  • Ancestral: Asian
  • Country: Korea
  • Diagnosis criteria: DSM-IV, K-CARS
  • Final diagnosis: ASD
  • Family : Total Family: 126 Simplex Family: 126
  • Affected: All: 126 Women: 17 Age: 6.0 ± 2.6 Age Range: (2.2-15.4) IQ:65.0 ± 27.7 IQ Range:(25-126)
  • Unaffected: All:(25-126)
OTHERS
Results Alele 1 Alele 2 Statistic Method P value Study Information
C Tothers -Anderson,2009_1
  • Ancestral: Caucasian
  • Country: USA, AGRE
  • Diagnosis criteria: DSM-IV,ADI-R
  • Final diagnosis: ASD
  • Family : Total Family: 403 Simplex Family: 252 Multiplex Family: 151
  • Affected: All: - Women: - Age: - Age Range: (3-21) IQ:- IQ Range:-
  • Unaffected: All:-
Case-Control Based Association Studies: 1 results 
Results Alele Type Genotype P value Study Information
Allele 1 Allele 2 Allele 1/Allele 1 Allele 1/Allele 2 Allele 2/Allele 2

ASD
CTR
T
- (45.00%)
- (49.00%)
C
- (55.00%)
- (51.00%)
T/T
- (20.00%)
- (21.00%)
T/C
- (51.00%)
- (55.00%)
C/C
- (29.00%)
- (24.00%)
0.8Guhathakurta,2009_1
  • Ancestral: Asian
  • Country: India
  • Diagnosis criteria: ADI-R, CARS
  • Final diagnosis: ASD
  • Case description: People:120 Women: 20
  • Age: 5.84 ± 2.96
  • Control description: People: 101 Women:
Genome-Wide Association Studies
Family Based Association Studies: 0 results 
Case-Control Based Association Studies: 0 results 

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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