AutismKB

Detailed Information for rs38845

Basic Information
SNP Name:rs38845
SNP location:chr7:116109037-116109038
Related Gene:MET
Function:intron
Related Studies Statistic
FBATCase controlGWAS FBATGWAS case control
4 1 0 0
Low Scale Association Studies
Family Based Association Studies: 4 results 
Transmission Disequilibrium Test (TDT)
Results #Informative Families Alele Name Transmitted (frequency) Non-Transmitted (frequency) P valueStudy Information
357 G
A
- ( - )
- ( - )
- ( - )
- ( - )
0.59Zhou,2011_2
  • Ancestral: Asian
  • Country: China
  • Diagnosis criteria: DSM-IV, CARS, ABC
  • Final diagnosis: ASD, PDD-NOS
  • Family : Total Family: 361 Simplex Family: 361
  • Affected: All: 361 Women: 51 Age: 4.67 ± 2.19 Age Range: - IQ:- IQ Range:-
  • Unaffected: All:-
- A
G
289 ( - )
223 ( - )
223 ( - )
289 ( - )
0.0035Sosha,2009_1
  • Ancestral: Caucasian
  • Country: IMGSAC
  • Diagnosis criteria: ADI-R,VABS
  • Final diagnosis: ASD
  • Family : Total Family: 335 Simplex Family: 10 Multiplex Family: 325
  • Affected: All: - Women: - Age: - Age Range: - IQ:- IQ Range:-
  • Unaffected: All:-
- A
G
44 ( - )
43 ( - )
43 ( - )
44 ( - )
0.915Sosha,2009_2
  • Ancestral: Caucasian
  • Country: Italy
  • Diagnosis criteria: ADI-R,VABS
  • Final diagnosis: ASD
  • Family : Total Family: 82 Simplex Family: 82
  • Affected: All: - Women: - Age: - Age Range: - IQ:- IQ Range:-
  • Unaffected: All:-
- G
G
- (0.51%)
- (0.50%)
- (0.50%)
- (0.51%)
0.785Thanseem,2010_1
  • Ancestral: Asian
  • Country: Japan
  • Diagnosis criteria: DSM-IV, ADI-R
  • Final diagnosis: ASD
  • Family : Total Family: 126 Simplex Family: 126
  • Affected: All: 126 Women: 19 Age: 10.49 ± 4.75 Age Range: - IQ:82.06 ± 26.6 IQ Range:-
  • Unaffected: All:
Case-Control Based Association Studies: 1 results 
Results Alele Type Genotype P value Study Information
Allele 1 Allele 2 Allele 1/Allele 1 Allele 1/Allele 2 Allele 2/Allele 2

ASD
CTR
G
441 (0.55%)
716 (0.60%)
A
361 (0.45%)
472 (0.40%)
GG
126 (0.31%)
218 (0.37%)
GA
189 (0.47%)
280 (0.47%)
AA
86 (0.22%)
96 (0.16%)
0.019 Zhou,2011_1
  • Ancestral: Asian
  • Country: China
  • Diagnosis criteria: "DSM-IV, CARS, ABC"
  • Final diagnosis: "ASD, PDD"
  • Case description: People:401 Women: 56
  • Control description: People: 594 Women: 105
  • Age: 17.37 ± 5.62
Genome-Wide Association Studies
Family Based Association Studies: 0 results 
Case-Control Based Association Studies: 0 results 

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  (e.g. NLGN4X)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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