AutismKB


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Detailed Information for rs2020936

Basic Information
SNP Name:rs2020936
SNP location:chr17:25574939-25574940
Related Gene:SLC6A4
Function:intron
Related Studies Statistic
FBATCase controlGWAS FBATGWAS case control
6 0 0 0
Low Scale Association Studies
Family Based Association Studies: 6 results 
Transmission Disequilibrium Test (TDT)
Results #Informative Families Alele Name Transmitted (frequency) Non-Transmitted (frequency) P valueStudy Information
- T
C
40 ( - )
34 ( - )
34 ( - )
40 ( - )
0.56Wu,2005_1
  • Ancestral: Asian
  • Country: China
  • Diagnosis criteria: DSM-IV
  • Final diagnosis: ASD
  • Family : Total Family: 175 Simplex Family: 175
  • Affected: All: 175 Women: 14 Age: 6.08 ± 2.97 Age Range: - IQ:61.52 ± 19.77 IQ Range:-
  • Unaffected: All:-
- C
T
115 ( - )
107 ( - )
107 ( - )
115 ( - )
0.59Ramoz,2006_1
  • Ancestral: Caucasian
  • Country: USA, AGRE
  • Diagnosis criteria: ADI-R
  • Final diagnosis: AD
  • Family : Total Family: 352 Simplex Family: 80 Multiplex Family: 272
  • Affected: All: 645 Women: - Age: - Age Range: - IQ:- IQ Range:-
  • Unaffected: All:
- - C
T
35 ( - )
20 ( - )
20 ( - )
35 ( - )
0.043Kim,2002_1
  • Ancestral: Caucasian
  • Country: USA
  • Diagnosis criteria: ADI-R, ADOS, DSM-IV
  • Final diagnosis: AD
  • Family : Total Family: 115 Simplex Family: 108 Multiplex Family: 7
  • Affected: All: 115 Women: 17 Age: 7.1 ± 5.2 Age Range: - IQ:77.9 ± 24.5 IQ Range:-
  • Unaffected: All:-
84 T
C
42 ( - )
54 ( - )
54 ( - )
42 ( - )
0.2615Conroy,2004_1
  • Ancestral: Caucasian
  • Country: Ireland
  • Diagnosis criteria: ADI-R, ADOS-G
  • Final diagnosis: ASD
  • Family : Total Family: 84
  • Affected: All: - Women: - Age: - Age Range: - IQ:<35 IQ Range:-
  • Unaffected: All:-
- C
T
77 ( - )
387 ( - )
387 ( - )
375 ( - )
0.29McCauley,2004_1
  • Ancestral: Caucasian
  • Country: NEMC, AGRE
  • Diagnosis criteria: ADI, ADI-R, ADOS
  • Final diagnosis: AD
  • Family : Total Family: 137 Multiplex Family: 137
  • Affected: All: - Women: - Age: - Age Range: - IQ:- IQ Range:-
  • Unaffected: All:-
OTHERS
Results Alele 1 Alele 2 Statistic Method P value Study Information
C Tothers -Devlin,2005_1
  • Ancestral: Caucasian
  • Country: CPEA
  • Diagnosis criteria: DSM-IV, ADI-R, ADOS
  • Final diagnosis: ASD
  • Family : Total Family: 390 Simplex Family: 147 Multiplex Family: 160
  • Affected: All: - Women: - Age: - Age Range: - IQ:- IQ Range:-
  • Unaffected: All:-
Case-Control Based Association Studies: 0 results 
Genome-Wide Association Studies
Family Based Association Studies: 0 results 
Case-Control Based Association Studies: 0 results 

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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