AutismKB


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Detailed Information for rs140700

Basic Information
SNP Name:rs140700
SNP location:chr17:25567514-25567515
Related Gene:SLC6A4
Function:intron
Related Studies Statistic
FBATCase controlGWAS FBATGWAS case control
5 0 0 0
Low Scale Association Studies
Family Based Association Studies: 5 results 
Transmission Disequilibrium Test (TDT)
Results #Informative Families Alele Name Transmitted (frequency) Non-Transmitted (frequency) P valueStudy Information
- A
G
11 ( - )
13 ( - )
13 ( - )
11 ( - )
0.68Kim,2002_1
  • Ancestral: Caucasian
  • Country: USA
  • Diagnosis criteria: ADI-R, ADOS, DSM-IV
  • Final diagnosis: AD
  • Family : Total Family: 115 Simplex Family: 108 Multiplex Family: 7
  • Affected: All: 115 Women: 17 Age: 7.1 ± 5.2 Age Range: - IQ:77.9 ± 24.5 IQ Range:-
  • Unaffected: All:-
- A
G
29 ( - )
435 ( - )
435 ( - )
415 ( - )
0.02McCauley,2004_1
  • Ancestral: Caucasian
  • Country: NEMC, AGRE
  • Diagnosis criteria: ADI, ADI-R, ADOS
  • Final diagnosis: AD
  • Family : Total Family: 137 Multiplex Family: 137
  • Affected: All: - Women: - Age: - Age Range: - IQ:- IQ Range:-
  • Unaffected: All:-
- A
G
124 ( - )
93 ( - )
93 ( - )
124 ( - )
0.03Sutcliffe,2005_1
  • Ancestral: Caucasian
  • Country: AGRE, USA
  • Diagnosis criteria: ADI
  • Final diagnosis: ASD
  • Family : Total Family: 384 Simplex Family: 43 Multiplex Family: 341
  • Affected: All: - Women: - Age: - Age Range: - IQ:- IQ Range:-
  • Unaffected: All:-
OTHERS
Results Alele 1 Alele 2 Statistic Method P value Study Information
A GPDT -Ma,2009_1
  • Ancestral: Caucasian (non-Hispanic)
  • Country:
  • Diagnosis criteria: DSM-IV,ADI-R
  • Final diagnosis: autism
  • Family : Total Family: 290
  • Affected: All: - Women: - Age: - Age Range: - IQ:- IQ Range:-
  • Unaffected: All:-
A Gothers -Anderson,2009_1
  • Ancestral: Caucasian
  • Country: USA, AGRE
  • Diagnosis criteria: DSM-IV,ADI-R
  • Final diagnosis: ASD
  • Family : Total Family: 403 Simplex Family: 252 Multiplex Family: 151
  • Affected: All: - Women: - Age: - Age Range: (3-21) IQ:- IQ Range:-
  • Unaffected: All:-
Case-Control Based Association Studies: 0 results 
Genome-Wide Association Studies
Family Based Association Studies: 0 results 
Case-Control Based Association Studies: 0 results 

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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