AutismKB

Evidence Detail for SPARCL1


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Basic Information Top
Gene Symbol:SPARCL1 ( PIG33,SC1 )
Gene Full Name: SPARC-like 1 (hevin)
Band: 4q22.1
Quick LinksEntrez ID:8404; OMIM: 606041; Uniprot ID:SPRL1_HUMAN; ENSEMBL ID: ENSG00000152583
Sequences Top
>SPARCL1|8404|nucleotide
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>SPARCL1|8404|protein
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Evidence Statistic Top

Click the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default.
Evidences Syndromic Gene GWAS Expression CNV Linkage Low Scale Association Other Studies Total
Score (No. of Studies) No 0 (0) 1 (1) 1 (1) 1 (1) 0 (0) 0 (0) 4 (2)
Syndromic Autism Gene Top
Low Scale Association Studies (by Ethnic Group) Top
Genome-Wide Association Studies(By Ethnic Group) Top
Other Low Scale Gene Studies Top
Large Scale Expression Studies Top
Microarray Studies: 1
Reference Population Tissue #Subjects
(% Women)
ADI-R ADOS Endo- pheno Diagnosis Normal Controls
(% Women)
Fold Change Up/ Down P/Q value
Purcell, 2001_2 America cerebellum 9
(-)
-autism 4
(-)
1.54 Up -
  • Platform: UniGEM V2 array
  • ProbeSet: -
  • RefSeq_ID/ EST: X86693
  • GEO_ID: -
  • Statistic Method: ratio of autism/control
Proteomics Studies:0
Reference Population Tissue Platform #Subjects
(% Women)
ADI-R ADOS Diagnosis Normal Controls(% Women)
No Evidence.
CNV Studies Top
CNV Name Chr Band Gain/Loss Number of CNVs Evidence Type Reference
Case Control
AutCNV0000130 4 4q21-23 loss 1 - Denovo CNVs; Jacquemont, 2006
Linkage Studies Top
Linkage Name Band Chr Marker LOD NPL P_Value Reference
AutLD0000012 4q21.23-22.3 4 D4S2361/D4S2909 1.72 - - Yonan, 2003

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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