AutismKB

Evidence Detail for SLTM


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Basic Information Top
Gene Symbol:SLTM ( DKFZp762G052,FLJ10005,FLJ13213,Met )
Gene Full Name: SAFB-like, transcription modulator
Band: 15q22.1
Quick LinksEntrez ID:79811; OMIM: ; Uniprot ID:SLTM_HUMAN; ENSEMBL ID: ENSG00000137776
Sequences Top
>SLTM|79811|nucleotide
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>SLTM|79811|protein
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Evidence Statistic Top

Click the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default.
Evidences Syndromic Gene GWAS Expression CNV Linkage Low Scale Association Other Studies Total
Score (No. of Studies) No 2 (2) 0 (0) 1 (4) 1 (1) 0 (0) 0 (0) 15 (3)
Syndromic Autism Gene Top
Low Scale Association Studies (by Ethnic Group) Top
Genome-Wide Association Studies(By Ethnic Group) Top
Family Based Association Studies: 2
Reference Stage #SNPs/ #VNTRs #Families Affecteds Result
#Subjects
(% Women)
ADI-R ADOS Diagnosis Age
(range)
IQ
(range)
CAUCASIAN
Salyakina, 2010_2 Replication 6 (detail) 110 -
(-)
AS -
(3-21)
-
>70
Salyakina, 2010_1 Discovery 6 (detail) 124 -
(-)
AS -
(3-21)
-
>70
Case Control Based Association Studies: 0
Reference Stage #SNPs/ #VNTRs ASD Cases Normal Controls Result
#Subjects
(% Women)
ADI-R ADOS Diagnosis Age
(range)
IQ #Subjects
(% Women)
Age
(range)
No Evidence.
Other Low Scale Gene Studies Top
Large Scale Expression Studies Top
CNV Studies Top
CNV Name Chr Band Gain/Loss Number of CNVs Evidence Type Reference
Case Control
AutCNV0000028 15 15q21.2-26.3 gain 1 - CNVs Overlapping With ACRD; Szatmari, 2007
AutCNV0000110 15 15q21.2-26.3 gain 1 - Overlapping/Recurrent CNVs; Szatmari, 2007
AutCNV0000230 15 15q21.3 gain 1 - CNVs Only Present In Patients; Christian, 2008
AutCNV0000274 15 15q22 loss 1 - CNVs Only Present In Patients; Wassink, 2001
AutCNV0000291 15 15q22-23 loss 1 - CNVs Only Present In Patients; Smith, 2000
Linkage Studies Top
Linkage Name Band Chr Marker LOD NPL P_Value Reference
AutLD0000157 15q21.2-q22.1 15 rs11856 5.31 - - Allen-Brady, 2010
AutLD0000158 15q21.1-q22.2 15 rs383902 1.49 - - Allen-Brady, 2010

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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