AutismKB

Evidence Detail for COMMD4


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Basic Information Top
Gene Symbol:COMMD4 ( FLJ20452 )
Gene Full Name: COMM domain containing 4
Band: 15q24.2
Quick LinksEntrez ID:54939; OMIM: ; Uniprot ID:COMD4_HUMAN; ENSEMBL ID: ENSG00000140365
Sequences Top
>COMMD4|54939|nucleotide
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>COMMD4|54939|protein
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Evidence Statistic Top

Click the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default.
Evidences Syndromic Gene GWAS Expression CNV Linkage Low Scale Association Other Studies Total
Score (No. of Studies) No 0 (0) 1 (1) 1 (4) 0 (0) 0 (0) 0 (0) 3 (1)
Syndromic Autism Gene Top
Low Scale Association Studies (by Ethnic Group) Top
Genome-Wide Association Studies(By Ethnic Group) Top
Other Low Scale Gene Studies Top
Large Scale Expression Studies Top
Microarray Studies: 1
Reference Population Tissue #Subjects
(% Women)
ADI-R ADOS Endo- pheno Diagnosis Normal Controls
(% Women)
Fold Change Up/ Down P/Q value
Hu, 2009_1 mixed lymphoblastoid cell lines 21
(-)
autism with nonaffected sib pairsautism 17
(-)
1.26 Up -
  • Platform: a custom printed microarray containing 39,936 human PCR amplicon probes derived from cDNA clones purchased from Research Genetics (Invitrogen )
  • ProbeSet: -
  • RefSeq_ID/ EST: AA458486
  • GEO_ID: GSE15451
  • Statistic Method: one-class SAM by MeV
Proteomics Studies:0
Reference Population Tissue Platform #Subjects
(% Women)
ADI-R ADOS Diagnosis Normal Controls(% Women)
No Evidence.
CNV Studies Top
CNV Name Chr Band Gain/Loss Number of CNVs Evidence Type Reference
Case Control
AutCNV0000028 15 15q21.2-26.3 gain 1 - CNVs Overlapping With ACRD; Szatmari, 2007
AutCNV0000110 15 15q21.2-26.3 gain 1 - Overlapping/Recurrent CNVs; Szatmari, 2007
AutCNV0000150 15 15q23-24.2 loss 1 - Denovo CNVs; Marshall, 2008
AutCNV0000694 15 15q24.2 Gain null null CNVs Not Present In Control; Berkel, 2010
AutCNV0004322 15 15q23-q24.2 loss 1 - Overlapping/Recurrent CNVs; Sanders, 2011
Linkage Studies Top

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  (e.g. CDH8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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