AutismKB

Evidence Detail for EEF2K


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Basic Information Top
Gene Symbol:EEF2K ( HSU93850,MGC45041,eEF-2K )
Gene Full Name: eukaryotic elongation factor-2 kinase
Band: 16p12.2
Quick LinksEntrez ID:29904; OMIM: 606968; Uniprot ID:EF2K_HUMAN; ENSEMBL ID: ENSG00000103319
Sequences Top
>EEF2K|29904|nucleotide
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>EEF2K|29904|protein
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Evidence Statistic Top

Click the link of the category-specific score to view different category of evidences. The categories without any evidences are hidden by default.
Evidences Syndromic Gene GWAS Expression CNV Linkage Low Scale Association Other Studies Total
Score (No. of Studies) No 0 (0) 1 (1) 1 (4) 0 (0) 0 (1) 0 (0) 3 (2)
Syndromic Autism Gene Top
Low Scale Association Studies (by Ethnic Group) Top
Family Based Association Studies: 1
Case Control Based Association Studies: 0
Reference Population #SNPs/ #VNTRs ASD Cases Normal Controls Result
#Subjects
(% Women)
ADI-R ADOS Diagnosis Age
(range)
IQ #Subjects
(% Women)
Age
(range)
No Evidence.
Genome-Wide Association Studies(By Ethnic Group) Top
Other Low Scale Gene Studies Top
Large Scale Expression Studies Top
Microarray Studies: 1
Reference Population Tissue #Subjects
(% Women)
ADI-R ADOS Endo- pheno Diagnosis Normal Controls
(% Women)
Fold Change Up/ Down P/Q value
Voineagu, 2011_1 Unknown 16 frontal cortex(BA9) and 13 temporal cortex(BA41 16
(25.00%)
-autism 16
(6.25%)
0.927797 Down 20.8011
  • Platform: Illumina Ref8 v3 microarrays
  • ProbeSet: ILMN_1789171
  • RefSeq_ID/ EST: -
  • GEO_ID: GSE28521
  • Statistic Method: SAM package and unless otherwise specified the significance threshold was FDR,0.05 and fold changes.1.3.
Proteomics Studies:0
Reference Population Tissue Platform #Subjects
(% Women)
ADI-R ADOS Diagnosis Normal Controls(% Women)
No Evidence.
CNV Studies Top
CNV Name Chr Band Gain/Loss Number of CNVs Evidence Type Reference
Case Control
AutCNV0000183 16 16p12.2 gain 1 - Other; Marshall, 2008
AutCNV0000184 16 16p12.2 loss 1 - Other; Marshall, 2008
AutCNV0000743 16 16p12.1 loss 1 - paternal Bremer, 2011
AutCNV0000755 16 16p12.1 loss 1 - paternal Pinto, 2010
AutCNV0000793 16 16p12.1 loss 1 - maternal Pinto, 2010
AutCNV0003990 16 16p12.1 gain 1 - CNVs Only Present In Patients; Levy, 2011
Linkage Studies Top

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
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