AutismKB


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Copy Number Variation Related Gene List(Chromosome View)

This dataset contains 1113 genes. We collected all the Copy Number Variants(CNVs) from related studies in the dataset. If the study gave the exact start and end point, we collected all the genes in the given region; if not, we deduced genomic region from the band, and collected all the genes in the band.
According to the number of related studies, genes in the dataset are scored 3, 2, 1. If one gene have 2 or more relate studies, and each study has at least one exact region for this gene, the gene will be listed below. The higher the score, the more confident the gene is. (More information about the dataset)
Gene ID Gene Symbol Band Gene Name #CNV studies Score
#Studies with exact region #Studies with deduced region
AutG5531 PPP4C 16p11.2 protein phosphatase 4, catalytic subunit 4 10 3
AutG283899 INO80E 16p11.2 INO80 complex subunit E 4 10 3
AutG338429 SNORD109B 15q11.2 small nucleolar RNA, C/D box 109B 8 12 3
AutG100033814 SNORD115-40 15q11.2 small nucleolar RNA, C/D box 115-40 8 12 3
AutG100033805 SNORD115-31 15q11.2 small nucleolar RNA, C/D box 115-31 8 12 3
AutG100033422 SNORD116-10 15q11.2 small nucleolar RNA, C/D box 116-10 8 12 3
AutG100033445 SNORD115-8 15q11.2 small nucleolar RNA, C/D box 115-8 8 12 3
AutG146378 C16orf92 16p11.2 chromosome 16 open reading frame 92 4 10 3
AutG3653 IPW 15q11-q12 imprinted in Prader-Willi syndrome (non-protein coding) 8 12 3
AutG283694 OR4N4 15q11.2 olfactory receptor, family 4, subfamily N, member 4 8 5 3
AutG79153 GDPD3 16p11.2 glycerophosphodiester phosphodiesterase domain containing 3 4 10 3
AutG100033822 SNORD115-48 15q11.2 small nucleolar RNA, C/D box 115-48 8 12 3
AutG100036563 SNORD115-24 15q11.2 small nucleolar RNA, C/D box 115-24 8 12 3
AutG100033447 SNORD115-10 15q11.2 small nucleolar RNA, C/D box 115-10 8 12 3
AutG100033816 SNORD115-42 15q11.2 small nucleolar RNA, C/D box 115-42 8 12 3
AutG390539 OR4N3P 15q11.2 olfactory receptor, family 4, subfamily N, member 3 pseudogene 8 5 3
AutG100033439 SNORD116-27 15q11.2 small nucleolar RNA, C/D box 116-27 8 12 3
AutG100036566 HBII-52-45 15q11.2 - 8 12 3
AutG283767 GOLGA6L1 15q11.2 golgin A6 family-like 1 8 8 3
AutG124446 TMEM219 16p11.2 transmembrane protein 219 4 10 3
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  (e.g. NLGN4X)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 616
  • Genes: 3,075
  • SNPs/VNTRs: 3,386
  • CNVs: 4,617
  • Linkage Regions: 158
  • Last Update: 05/25/2012
  • Click to Download Data

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